Honor Thy Father begins with a shot of the protagonist Edgar (John Lloyd Cruz) breaking the ground in a lawn in the Cordilleran highland city of Baguio. It is foreshadowing, both in a visual sense as Edgar later in the story breaks into a different territory with his brothers, and on a metaphorical level, as he would in the course of the story break and shake up his relationships, with people and with the land.
The setting maintains a strong, and beautiful, presence throughout the film. Baguio subtly comes to represent both the hopes of his family, and the instability and chaos they find themselves facing. Edgar’s wife, Kaye (Meryll Soriano), at one point talks about going to the mountains to escape their problems (a genius bit of characterizing detail, because for most Filipinos who live in lowlands, Baguio is a mountain city, and only highland urban residents would talk of going further up the mountains). Edgar does travel to still-higher and remoter lands of the Cordilleras, where he seeks his parents and brothers for help; his brothers, meanwhile, make a living as miners, blasting their way deeper into the mountains in search of minerals. In Honor Thy Father, the rolling urban terrain is a symbol of conflict; the dusty mine lands, of refuge and strength.